BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020C03SP1|AL427591
(886 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1555 1725 0.0
>3x_Contig1555
Length = 10828
Score = 1725 bits (865), Expect = 0.0
Identities = 876/885 (98%)
Strand = Plus / Plus
Query: 1 gatcctaaagacagaaagactatgagtgttaggaaattgaatgtgaagagagctatttga 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4489 gatcctaaagacagacagactatgagtgttaggaaattgaatgtgaagagagctatttga 4548
Query: 61 atgataagaatcgatacaagtracaatttccattctagtctttaaacaaaaaacatttat 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4549 atgataagaatcgatacaagtgacaatttccattctagtctttaaacaaaaaacatttat 4608
Query: 121 gggtaaactttatatttttcttcttaaaaacttaatatatgtyattatttatcatatata 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4609 gggtaaactttatatttttcttcttaaaaacttaatatatgtcattatttatcatatata 4668
Query: 181 agtgtgtgtatttattatttcgttaaacctcttttcttggagattccattggtatccatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4669 agtgtgtgtatttattatttcgttaaacctcttttcttggagattccattggtatccatc 4728
Query: 241 ctcttacaatttactggcaaagagttcgattgacaccggaaaaaagagctttagaataac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4729 ctcttacaatttactggcaaagagttcgattgacaccggaaaaaagagctttagaataac 4788
Query: 301 aatatgagaatagcccggactgccttaagcagtttctgtggcactttcttccgatttctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4789 aatatgagaatagcccggactgccttaagcagtttctgtggcactttcttccgatttctt 4848
Query: 361 ctcagttggagcattggcatctccttcactgagctttgattcagaactggcttcaggagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4849 ctcagttggagcattggcatctccttcactgagctttgattcagaactggcttcaggagt 4908
Query: 421 ttcgtcattagtctttgggatgttcttcctgtaaccagttaatgatcttgtcttttgacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4909 ttcgtcattagtctttgggatgttcttcctgtaaccagttaatgatcttgtcttttgacc 4968
Query: 481 agaaccaccgaaattctttgatctagttgcattcttggcgaggctgtattgcttcttagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4969 agaaccaccgaaattctttgatctagttgcattcttggcgaggctgtattgcttcttagt 5028
Query: 541 gacaacttccaatggttgtccctgatatgagaaatcggtcttgtgttcctcaaagaattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5029 gacaacttccaatggttgtccctgatatgagaaatcggtcttgtgttcctcaaagaattt 5088
Query: 601 gacacattcctccttcgtcttgaattcgacttcgacaacaccgttgaagtatttcttatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5089 gacacattcctccttcgtcttgaattcgacttcgacaacaccgttgaagtatttcttatg 5148
Query: 661 gtccttcttcaaacgaacttggttaacagtggtgaacccattgaagaacttctctagttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5149 gtccttcttcaaacgaacttggttaacagtggtgaacccattgaagaacttctctagttc 5208
Query: 721 ttcttgtaattctaggaatttmtctttatcttcattttcgatcttcttaaagttcataaa 780
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5209 ttcttgtaattctaggaatttatctttatcttcattttcgatcttcttaaagttcataaa 5268
Query: 781 cactaacactctttcgttcctgtccttaaamtcmmctgtctctamtggactctttctacg 840
|||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||
Sbjct: 5269 cactaacactctttcgttcctgtccttaaaatcaactgtctctaatggactctttctacg 5328
Query: 841 cacmttttcaccatcagcgctaacctctagaatcgtcgagtcctt 885
||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5329 cacattttcaccatcagcgctaacctctagaatcgtcgagtcctt 5373
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7372
Number of Sequences: 1807
Number of extensions: 7372
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 886
length of database: 10,358,551
effective HSP length: 16
effective length of query: 870
effective length of database: 10,329,639
effective search space: 8986785930
effective search space used: 8986785930
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)